STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60218.1Putative amidohydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase. (386 aa)    
Predicted Functional Partners:
AQM58862.1
Inhibitor of sigma-G Gin family protein.
       0.540
AQM59158.1
[F] COG0125 Thymidylate kinase.
       0.538
AQM60047.1
Conserved hypothetical protein; [S] COG3870 Uncharacterized protein conserved in bacteria.
       0.495
AQM60476.1
Hypothetical protein; PSP1 C-terminal conserved region family protein; [S] COG1774 Uncharacterized homolog of PSP1.
       0.485
AQM58986.1
ATPase associated with various cellular activities family protein; [L] COG2812 DNA polymerase III, gamma/tau subunits.
       0.485
AQM60705.1
Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone.
       0.481
NPD11_221
Sigma-54 interaction domain protein; [O] COG0606 Predicted ATPase with chaperone activity.
  
   0.454
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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