Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQM60923.1 | AQM61172.1 | NPD11_1738 | NPD11_1175 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | pspC domain protein; [KT] COG1983 Putative stress-responsive transcriptional regulator. | 0.504 |
| AQM60923.1 | AQM61280.1 | NPD11_1738 | NPD11_1739 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.846 |
| AQM60923.1 | AQM61385.1 | NPD11_1738 | NPD11_1740 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.844 |
| AQM60923.1 | glpK | NPD11_1738 | NPD11_2409 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.512 |
| AQM60923.1 | mfd | NPD11_1738 | NPD11_1736 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.640 |
| AQM60923.1 | pnp | NPD11_1738 | NPD11_246 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.507 |
| AQM60923.1 | polA | NPD11_1738 | NPD11_1018 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.458 |
| AQM60923.1 | prs | NPD11_1738 | NPD11_1741 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Ribose-phosphate diphosphokinase family protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.512 |
| AQM60923.1 | pth | NPD11_1738 | NPD11_1737 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.584 |
| AQM60923.1 | rplT | NPD11_1738 | NPD11_132 | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.492 |
| AQM61172.1 | AQM60923.1 | NPD11_1175 | NPD11_1738 | pspC domain protein; [KT] COG1983 Putative stress-responsive transcriptional regulator. | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 0.504 |
| AQM61280.1 | AQM60923.1 | NPD11_1739 | NPD11_1738 | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 0.846 |
| AQM61280.1 | AQM61385.1 | NPD11_1739 | NPD11_1740 | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.974 |
| AQM61280.1 | mfd | NPD11_1739 | NPD11_1736 | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.623 |
| AQM61280.1 | prs | NPD11_1739 | NPD11_1741 | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | Ribose-phosphate diphosphokinase family protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.743 |
| AQM61280.1 | pth | NPD11_1739 | NPD11_1737 | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.632 |
| AQM61385.1 | AQM60923.1 | NPD11_1740 | NPD11_1738 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | PDZ domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 0.844 |
| AQM61385.1 | AQM61280.1 | NPD11_1740 | NPD11_1739 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | HAMP domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.974 |
| AQM61385.1 | mfd | NPD11_1740 | NPD11_1736 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.632 |
| AQM61385.1 | prs | NPD11_1740 | NPD11_1741 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Ribose-phosphate diphosphokinase family protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.614 |
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