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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59949.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
AQM59446.1
Helix-turn-helix family protein; [K] COG1396 Predicted transcriptional regulators.
       0.836
AQM58769.1
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.791
AQM60759.1
Subtilase family protein; [O] COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
       0.667
AQM58899.1
Stage II sporulation family protein; [M] COG3409 Putative peptidoglycan-binding domain-containing protein.
       0.595
AQM59860.1
Hypothetical protein.
       0.467
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.455
AQM58767.1
Conserved hypothetical protein; [S] COG0586 Uncharacterized membrane-associated protein.
       0.447
AQM61006.1
PAP2 superfamily protein; [I] COG0671 Membrane-associated phospholipid phosphatase.
       0.436
AQM61385.1
[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   
    0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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