STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM61335.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
NPD11_548
Iron Transport-associated domain protein.
  
     0.726
AQM61046.1
Signal peptidase (SPase) II family protein.
  
     0.719
NPD11_813
Hypothetical protein.
  
     0.706
AQM60168.1
Glycosyl hydrolases 25 family protein; [M] COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
     0.693
NPD11_165
YGGT family protein; [S] COG0762 Predicted integral membrane protein.
  
     0.692
AQM61368.1
Ribosomal RNA adenine dimethylase family protein.
  
     0.669
AQM60048.1
Conserved hypothetical protein; [J] COG2868 Predicted ribosomal protein.
  
     0.650
AQM60604.1
Hypothetical protein.
  
     0.650
AQM60728.1
gtrA-like family protein; [S] COG2246 Predicted membrane protein.
  
     0.628
AQM59686.1
Glucose / Sorbosone dehydrogenase family protein.
  
     0.564
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.