STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM58844.1CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family protein; [M] COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC. (758 aa)    
Predicted Functional Partners:
AQM60879.1
ABC-2 type transporter family protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.921
AQM59481.1
ABC transporter family protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
    0.894
AQM60402.1
Zinc-binding dehydrogenase family protein; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate.
 
  
 0.839
AQM59378.1
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate; Belongs to the IspD/TarI cytidylyltransferase family. TarI subfamily.
 
  
 0.780
AQM59510.1
ABC transporter family protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 
 0.767
AQM60351.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
0.719
AQM61080.1
ABC-2 type transporter family protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.706
AQM59615.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family protein; [M] COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
 
    
0.424
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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