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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59692.1gtrA-like family protein; [S] COG2246 Predicted membrane protein. (139 aa)    
Predicted Functional Partners:
AQM61282.1
Bacterial membrane YfhO family protein; [S] COG4485 Predicted membrane protein.
 
  
 0.737
AQM61305.1
Bacterial membrane YfhO family protein; [S] COG4485 Predicted membrane protein.
 
  
 0.733
addA
Helicase-exonuclease AddAB, AddA subunit; ATP-dependent DNA helicase.
       0.513
AQM59870.1
Glycosyl transferase 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.499
addB
Helicase-exonuclease AddAB, AddB subunit; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
       0.498
AQM59312.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.479
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.