STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60735.1FAD dependent oxidoreductase family protein; [R] COG0579 Predicted dehydrogenase. (472 aa)    
Predicted Functional Partners:
AQM58751.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
  
    0.834
AQM59961.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.812
AQM60437.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
 
    0.802
AQM60364.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
 
    0.802
AQM60005.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.798
NPD11_648
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
 0.785
AQM60231.1
3H domain protein; [R] COG1827 Predicted small molecule binding protein (contains 3H domain).
       0.763
AQM60483.1
HDIG: HDIG domain protein.
       0.696
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.579
AQM59926.1
[K] COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding).
 
     0.528
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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