Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQM61073.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
AQM60877.1
4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein; [D] COG1192 ATPases involved in chromosome partitioning.
  
  
 0.759
spo0J
parB_part: ParB/RepB/Spo0J family partition domain protein; [K] COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
 
 0.756
AQM58757.1
Glycosyl hydrolases 18 family protein; [G] COG3325 Chitinase.
    
 
 0.679
AQM61083.1
Glycosyl hydrolases 18 family protein; [G] COG3325 Chitinase.
    
 
 0.679
AQM59350.1
Glycosyl hydrolases 18 family protein; [G] COG3325 Chitinase.
    
 
 0.679
noc
parB_part: ParB/RepB/Spo0J family partition domain protein; [K] COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
 
 0.595
scpA
scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.548
lonC
spore_lon_C: ATP-dependent protease, Lon family; [O] COG1067 Predicted ATP-dependent protease.
  
     0.485
spoIIIAB
spore_III_AB: stage III sporulation protein AB.
  
     0.482
AQM59762.1
Subtilase family protein; [O] COG1404 Subtilisin-like serine proteases.
 
 
 
 0.475
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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