STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM58971.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
AQM60211.1
Hypothetical protein.
       0.623
AQM60539.1
dUTPase family protein; [S] COG4508 Uncharacterized protein conserved in bacteria.
       0.574
AQM61271.1
Conserved hypothetical protein; [S] COG3238 Uncharacterized protein conserved in bacteria.
       0.485
AQM59003.1
[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
       0.444
AQM59762.1
Subtilase family protein; [O] COG1404 Subtilisin-like serine proteases.
       0.415
AQM60321.1
SEC-C motif family protein; [U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
       0.414
AQM59878.1
Beta-lactamase superfamily domain protein; [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
       0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.