STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59463.1Multicopper oxidase family protein. (1205 aa)    
Predicted Functional Partners:
AQM60171.1
Hypothetical protein.
       0.678
mnxE
mnxE domain protein.
       0.664
AQM59394.1
Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone.
  
 
 0.621
AQM58698.1
ATPase-IB1_Cu: copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.621
cadA
ATPase-IB2_Cd: cadmium-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.621
AQM59285.1
Hypothetical protein.
       0.618
AQM60483.1
HDIG: HDIG domain protein.
  
   
 0.525
AQM60247.1
FAD dependent oxidoreductase family protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
   
  
 0.493
AQM60725.1
Hypothetical protein.
       0.444
AQM58643.1
lytTr DNA-binding domain protein; [KT] COG3279 Response regulator of the LytR/AlgR family.
       0.444
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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