Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQM58933.1 | AQM60357.1 | NPD11_1540 | NPD11_1989 | Hypothetical protein. | Dual specificity phosphatase, catalytic domain protein. | 0.936 |
| AQM59477.1 | AQM60357.1 | NPD11_2499 | NPD11_1989 | 2A0309: spore germination family protein. | Dual specificity phosphatase, catalytic domain protein. | 0.430 |
| AQM60357.1 | AQM58933.1 | NPD11_1989 | NPD11_1540 | Dual specificity phosphatase, catalytic domain protein. | Hypothetical protein. | 0.936 |
| AQM60357.1 | AQM59477.1 | NPD11_1989 | NPD11_2499 | Dual specificity phosphatase, catalytic domain protein. | 2A0309: spore germination family protein. | 0.430 |
| AQM60357.1 | AQM60588.1 | NPD11_1989 | NPD11_1990 | Dual specificity phosphatase, catalytic domain protein. | Putative membrane protein. | 0.503 |
| AQM60357.1 | dnaK | NPD11_1989 | NPD11_2933 | Dual specificity phosphatase, catalytic domain protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.444 |
| AQM60357.1 | lepA | NPD11_1989 | NPD11_2928 | Dual specificity phosphatase, catalytic domain protein. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.797 |
| AQM60357.1 | polA | NPD11_1989 | NPD11_1018 | Dual specificity phosphatase, catalytic domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.467 |
| AQM60588.1 | AQM60357.1 | NPD11_1990 | NPD11_1989 | Putative membrane protein. | Dual specificity phosphatase, catalytic domain protein. | 0.503 |
| dnaK | AQM60357.1 | NPD11_2933 | NPD11_1989 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Dual specificity phosphatase, catalytic domain protein. | 0.444 |
| dnaK | lepA | NPD11_2933 | NPD11_2928 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.672 |
| dnaK | polA | NPD11_2933 | NPD11_1018 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.631 |
| lepA | AQM60357.1 | NPD11_2928 | NPD11_1989 | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Dual specificity phosphatase, catalytic domain protein. | 0.797 |
| lepA | dnaK | NPD11_2928 | NPD11_2933 | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.672 |
| lepA | polA | NPD11_2928 | NPD11_1018 | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.731 |
| polA | AQM60357.1 | NPD11_1018 | NPD11_1989 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Dual specificity phosphatase, catalytic domain protein. | 0.467 |
| polA | dnaK | NPD11_1018 | NPD11_2933 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.631 |
| polA | lepA | NPD11_1018 | NPD11_2928 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.731 |