Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQM59287.1 | AQM59392.1 | NPD11_2009 | NPD11_2007 | Hypothetical protein. | Bacterial regulatory s, crp family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.478 |
| AQM59287.1 | AQM60661.1 | NPD11_2009 | NPD11_2010 | Hypothetical protein. | Hypothetical protein. | 0.490 |
| AQM59287.1 | AQM60938.1 | NPD11_2009 | NPD11_2008 | Hypothetical protein. | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.834 |
| AQM59392.1 | AQM59287.1 | NPD11_2007 | NPD11_2009 | Bacterial regulatory s, crp family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.478 |
| AQM59392.1 | AQM60661.1 | NPD11_2007 | NPD11_2010 | Bacterial regulatory s, crp family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.460 |
| AQM59392.1 | AQM60938.1 | NPD11_2007 | NPD11_2008 | Bacterial regulatory s, crp family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.478 |
| AQM59824.1 | AQM60661.1 | NPD11_2093 | NPD11_2010 | HDIG: HDIG domain protein; [H] COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism. | Hypothetical protein. | 0.463 |
| AQM59824.1 | NPD11_755 | NPD11_2093 | NPD11_755 | HDIG: HDIG domain protein; [H] COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism. | Bacterial extracellular solute-binding family protein; [G] COG1653 ABC-type sugar transport system, periplasmic component. | 0.493 |
| AQM60661.1 | AQM59287.1 | NPD11_2010 | NPD11_2009 | Hypothetical protein. | Hypothetical protein. | 0.490 |
| AQM60661.1 | AQM59392.1 | NPD11_2010 | NPD11_2007 | Hypothetical protein. | Bacterial regulatory s, crp family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.460 |
| AQM60661.1 | AQM59824.1 | NPD11_2010 | NPD11_2093 | Hypothetical protein. | HDIG: HDIG domain protein; [H] COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism. | 0.463 |
| AQM60661.1 | AQM60938.1 | NPD11_2010 | NPD11_2008 | Hypothetical protein. | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.490 |
| AQM60661.1 | NPD11_755 | NPD11_2010 | NPD11_755 | Hypothetical protein. | Bacterial extracellular solute-binding family protein; [G] COG1653 ABC-type sugar transport system, periplasmic component. | 0.551 |
| AQM60661.1 | hcp | NPD11_2010 | NPD11_2011 | Hypothetical protein. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.477 |
| AQM60661.1 | ric | NPD11_2010 | NPD11_1265 | Hypothetical protein. | Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.462 |
| AQM60938.1 | AQM59287.1 | NPD11_2008 | NPD11_2009 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Hypothetical protein. | 0.834 |
| AQM60938.1 | AQM59392.1 | NPD11_2008 | NPD11_2007 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Bacterial regulatory s, crp family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. | 0.478 |
| AQM60938.1 | AQM60661.1 | NPD11_2008 | NPD11_2010 | sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Hypothetical protein. | 0.490 |
| NPD11_755 | AQM59824.1 | NPD11_755 | NPD11_2093 | Bacterial extracellular solute-binding family protein; [G] COG1653 ABC-type sugar transport system, periplasmic component. | HDIG: HDIG domain protein; [H] COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism. | 0.493 |
| NPD11_755 | AQM60661.1 | NPD11_755 | NPD11_2010 | Bacterial extracellular solute-binding family protein; [G] COG1653 ABC-type sugar transport system, periplasmic component. | Hypothetical protein. | 0.551 |
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