Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQM59061.1Peptidase C26 family protein; [R] COG2071 Predicted glutamine amidotransferases. (242 aa)    
Predicted Functional Partners:
NPD11_92
Membrane dipeptidase family protein; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
     0.900
AQM60451.1
Glutamine synthetase, catalytic domain protein; [E] COG0174 Glutamine synthetase.
  
  
 0.599
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.463
crcB
crcB-like family protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.442
AQM60909.1
Hypothetical protein; Prc: C-terminal processing peptidase family protein; [M] COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
   
    0.412
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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