STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59566.1Heavy-metal-associated domain protein. (126 aa)    
Predicted Functional Partners:
AQM59394.1
Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone.
  
 
 0.529
AQM58698.1
ATPase-IB1_Cu: copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.529
AQM59189.1
Heavy-metal-associated domain protein.
  
 
 0.529
cadA
ATPase-IB2_Cd: cadmium-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.529
AQM60705.1
Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone.
  
 
 0.529
AQM61443.1
Putative membrane protein.
       0.473
AQM60728.1
gtrA-like family protein; [S] COG2246 Predicted membrane protein.
       0.439
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
  
 0.438
AQM59870.1
Glycosyl transferase 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
     
 0.423
AQM61138.1
MBOAT, membrane-bound O-acyltransferase family protein; [M] COG1696 Predicted membrane protein involved in D-alanine export.
  
    0.414
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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