STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM58982.1glu-decarb-GAD: glutamate decarboxylase; [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family. (468 aa)    
Predicted Functional Partners:
glsA
Gln_ase: glutaminase A; [E] COG2066 Glutaminase; Belongs to the glutaminase family.
  
 
 0.917
glsA-2
Gln_ase: glutaminase A; [E] COG2066 Glutaminase; Belongs to the glutaminase family.
  
 
 0.917
AQM60007.1
acyl-CoA reductase family protein; [C] COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
   
 0.912
AQM60451.1
Glutamine synthetase, catalytic domain protein; [E] COG0174 Glutamine synthetase.
  
 
 0.910
AQM58668.1
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.910
gltA
gltA: glutamate synthase (NADPH), homotetrameric; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
  0.900
AQM61094.1
NAD-dependent glycerol-3-phosphate dehydrogenase family protein; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
  0.900
AQM59803.1
glu-decarb-GAD: glutamate decarboxylase; [E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family.
  
  
 
0.900
gltA-2
gltA: glutamate synthase (NADPH), homotetrameric; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
  0.900
gadC
Glutamate:gamma-aminobutyrate antiporter; 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter; [E] COG0531 Amino acid transporters.
 
  
 0.868
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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