STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59708.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
AQM60497.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein; [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.845
AQM59946.1
Aminotransferase class-V family protein; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
 
    0.790
AQM58668.1
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
      0.737
ypdE
Peptidase M20/M25/M40 family protein; [G] COG1363 Cellulase M and related proteins.
  
    0.452
AQM60108.1
Hypothetical protein; Bacterial purine repressor, N-terminal family protein; [K] COG3711 Transcriptional antiterminator.
       0.442
AQM60482.1
PTS system, Lactose/Cellobiose specific IIA subunit; [G] COG1447 Phosphotransferase system cellobiose-specific component IIA.
       0.436
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.426
AQM58670.1
PTS system, Lactose/Cellobiose specific IIB subunit; [G] COG1440 Phosphotransferase system cellobiose-specific component IIB.
       0.415
NPD11_106
Hypothetical protein; [S] COG3391 Uncharacterized conserved protein.
   
    0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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