STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59380.1PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component domain protein; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. (523 aa)    
Predicted Functional Partners:
ptbA
PTBA: PTS system, glucose subfamily, IIA component domain protein; [G] COG2190 Phosphotransferase system IIA components.
 0.998
malH
Maltose-6'-phosphate glucosidase malH; [G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
 
 
 0.993
AQM60214.1
Glycosyl hydrolase family 20, catalytic domain protein; [G] COG3525 N-acetyl-beta-hexosaminidase.
  
  
 0.971
NPD11_679
PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 
 0.927
NPD11_619
PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component family protein; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
0.894
ptsG
PTS system glucose-specific EIICBA component; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 
0.887
fruA
fruA: PTS system, fructose subfamily, IIA component domain protein; [G] COG1299 Phosphotransferase system, fructose-specific IIC component.
  
  
 0.821
AQM59204.1
ROK family protein; [KG] COG1940 Transcriptional regulator/sugar kinase.
  
 
 0.770
AQM59992.1
ROK family protein; [KG] COG1940 Transcriptional regulator/sugar kinase.
  
 
 0.770
AQM60004.1
SIS domain protein; [K] COG1737 Transcriptional regulators.
 
  
 0.770
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.