STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60445.1abgT transporter family protein; [H] COG2978 Putative p-aminobenzoyl-glutamate transporter. (511 aa)    
Predicted Functional Partners:
NPD11_279
Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
  
    0.594
AQM58684.1
Dolichyl-phosphate-mannose-mannosyltransferase family protein.
       0.519
AQM60134.1
Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria.
       0.433
AQM60133.1
Amidohydrolases: amidohydrolase family protein; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
 
  
 0.419
AQM61403.1
Sodium:dicarboxylate symporter family protein; [C] COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.416
AQM59171.1
Sodium:dicarboxylate symporter family protein; [C] COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.402
nox
trkA-N domain protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
    0.402
NPD11_648
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
    0.402
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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