STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59990.1Sulfatase family protein; [M] COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. (613 aa)    
Predicted Functional Partners:
AQM60254.1
Type I phosphodiesterase / nucleotide pyrophosphatase family protein; [M] COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
  
  
 
0.915
AQM60440.1
Glycosyl transferases group 1 family protein; [M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
  
 
 0.912
AQM59640.1
Sulfatase domain protein.
      
0.705
AQM58684.1
Dolichyl-phosphate-mannose-mannosyltransferase family protein.
 
    0.676
AQM59953.1
Putative lipoprotein.
  
    0.469
AQM59446.1
Helix-turn-helix family protein; [K] COG1396 Predicted transcriptional regulators.
  
     0.460
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.