STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpQ[C] COG0584 Glycerophosphoryl diester phosphodiesterase. (241 aa)    
Predicted Functional Partners:
AQM60399.1
Membrane domain of glycerophosphoryl diester phosphodiesterase family protein; [C] COG0584 Glycerophosphoryl diester phosphodiesterase.
 
  
 
0.922
AQM60373.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
  
 0.721
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.706
AQM59649.1
mgtC family protein; [S] COG1285 Uncharacterized membrane protein.
       0.625
NPD11_753
Binding--dependent transport system inner membrane component family protein; [G] COG0395 ABC-type sugar transport system, permease component.
  
  
 0.547
AQM60783.1
MIP: MIP channel s family protein; [G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.503
AQM60575.1
MIP: MIP channel s family protein; [G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.503
fusA-2
EF-G: translation elongation factor G; [J] COG0480 Translation elongation factors (GTPases).
  
  
 0.465
pstA
3a0107s02c: phosphate ABC transporter, permease protein PstA; [P] COG0581 ABC-type phosphate transport system, permease component.
  
  
 0.448
AQM61032.1
PAP2 superfamily protein; [I] COG0671 Membrane-associated phospholipid phosphatase.
 
 0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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