node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQM58789.1 | AQM58933.1 | NPD11_2193 | NPD11_1540 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | Hypothetical protein. | 0.884 |
AQM58789.1 | AQM58978.1 | NPD11_2193 | NPD11_2192 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | yvrJ family protein. | 0.642 |
AQM58789.1 | NPD11_798 | NPD11_2193 | NPD11_798 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DEAD/DEAH box helicase family protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.999 |
AQM58789.1 | dnaN | NPD11_2193 | NPD11_1907 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.812 |
AQM58789.1 | polA | NPD11_2193 | NPD11_1018 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.919 |
AQM58789.1 | rpoA | NPD11_2193 | NPD11_1619 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.983 |
AQM58789.1 | rpoB | NPD11_2193 | NPD11_1655 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.973 |
AQM58789.1 | rpoC | NPD11_2193 | NPD11_1654 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
AQM58789.1 | rpoZ | NPD11_2193 | NPD11_179 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.989 |
AQM58789.1 | sbcD | NPD11_2193 | NPD11_1878 | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.628 |
AQM58933.1 | AQM58789.1 | NPD11_1540 | NPD11_2193 | Hypothetical protein. | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | 0.884 |
AQM58933.1 | NPD11_798 | NPD11_1540 | NPD11_798 | Hypothetical protein. | DEAD/DEAH box helicase family protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.914 |
AQM58933.1 | rpoA | NPD11_1540 | NPD11_1619 | Hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.893 |
AQM58933.1 | rpoB | NPD11_1540 | NPD11_1655 | Hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.905 |
AQM58933.1 | rpoZ | NPD11_1540 | NPD11_179 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.907 |
AQM58978.1 | AQM58789.1 | NPD11_2192 | NPD11_2193 | yvrJ family protein. | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | 0.642 |
NPD11_798 | AQM58789.1 | NPD11_798 | NPD11_2193 | DEAD/DEAH box helicase family protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | DEAD_2 family protein; [KL] COG1199 Rad3-related DNA helicases. | 0.999 |
NPD11_798 | AQM58933.1 | NPD11_798 | NPD11_1540 | DEAD/DEAH box helicase family protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | Hypothetical protein. | 0.914 |
NPD11_798 | polA | NPD11_798 | NPD11_1018 | DEAD/DEAH box helicase family protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.972 |
NPD11_798 | rpoA | NPD11_798 | NPD11_1619 | DEAD/DEAH box helicase family protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |