Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ndoApemK-like family protein; Toxic component of a type II toxin-antitoxin (TA) system. (114 aa)    
Predicted Functional Partners:
AQM60654.1
Hypothetical protein.
  
 
 0.908
AQM60299.1
Hypothetical protein.
       0.732
AQM60595.1
Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; [G] COG3959 Transketolase, N-terminal subunit.
       0.574
AQM59421.1
Transketolase, C-terminal domain protein; [G] COG3958 Transketolase, C-terminal subunit.
       0.574
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
      
 0.526
pyrF
pyrF_sub2: orotidine 5'-phosphate decarboxylase; [F] COG0284 Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
     
 0.525
tdk
[F] COG1435 Thymidine kinase.
      
 0.489
AQM59395.1
hxlR-like helix-turn-helix family protein; [K] COG1733 Predicted transcriptional regulators.
   
    0.485
AQM59888.1
hxlR-like helix-turn-helix family protein; [K] COG1733 Predicted transcriptional regulators.
   
    0.485
AQM61104.1
hxlR-like helix-turn-helix family protein; [K] COG1733 Predicted transcriptional regulators.
   
    0.485
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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