STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59526.1badF/BadG/BcrA/BcrD ATPase family protein; [KG] COG1940 Transcriptional regulator/sugar kinase. (315 aa)    
Predicted Functional Partners:
ptsG
PTS system glucose-specific EIICBA component; [G] COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
 0.981
pgi
Phosphoglucose isomerase family protein; [G] COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.925
pgcA
Hypothetical protein; Phosphoglucomutase/phosphomannomutase, C-terminal domain protein; [G] COG1109 Phosphomannomutase.
  
 
 0.910
AQM59560.1
Aldose 1-epimerase family protein; Converts alpha-aldose to the beta-anomer.
  
 
 0.910
AQM60029.1
Hypothetical protein; Family 4 glycosyl hydrolase C-terminal domain protein; [G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
  
 
 0.906
ptbA
PTBA: PTS system, glucose subfamily, IIA component domain protein; [G] COG2190 Phosphotransferase system IIA components.
  
 
 0.905
AQM59977.1
BGL: beta-galactosidase; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
 
 0.905
gmuD
[G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.905
NPD11_286
Glycosyl hydrolase 1 family protein; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.905
NPD11_743
BGL: beta-galactosidase; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.905
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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