STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59375.1CDF: cation diffusion facilitator transporter family protein; [P] COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (393 aa)    
Predicted Functional Partners:
AQM61512.1
Aminopeptidase I zinc metalloprotease family protein; [E] COG1362 Aspartyl aminopeptidase.
       0.628
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
    0.560
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.560
AQM59223.1
Hypothetical protein.
       0.494
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
   0.472
AQM59394.1
Heavy-metal-associated domain protein; [P] COG2608 Copper chaperone.
  
 
 0.461
AQM58698.1
ATPase-IB1_Cu: copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.461
cadA
ATPase-IB2_Cd: cadmium-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.461
atpE-2
ATP synthase (E/31 kDa) subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
    0.453
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
    0.443
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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