STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60791.1Conserved hypothetical protein; [S] COG1289 Predicted membrane protein. (600 aa)    
Predicted Functional Partners:
AQM61249.1
Conserved hypothetical protein; [R] COG1988 Predicted membrane-bound metal-dependent hydrolases.
  
   
 0.510
AQM59693.1
Hypothetical protein.
  
    0.507
AQM60481.1
Glycosyltransferase 36 associated family protein; [G] COG3459 Cellobiose phosphorylase.
       0.465
AQM60183.1
nifU-like N terminal domain protein; [C] COG0822 NifU homolog involved in Fe-S cluster formation.
   
    0.459
nifU
nifU_clost: FeS cluster assembly scaffold protein NifU; [C] COG0822 NifU homolog involved in Fe-S cluster formation.
   
    0.459
AQM60378.1
Serine dehydratase alpha chain family protein; [S] COG3681 Uncharacterized conserved protein; Belongs to the UPF0597 family.
     
 0.452
AQM60910.1
Putative membrane protein.
  
     0.409
AQM59340.1
Hypothetical protein.
 
     0.409
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.