STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59020.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
AQM59799.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.773
AQM60684.1
Heparinase II/III-like family protein.
       0.727
AQM60324.1
Glycosyltransferase, group 2 family domain protein.
       0.682
AQM59811.1
wecB: UDP-N-acetylglucosamine 2-epimerase; [M] COG0381 UDP-N-acetylglucosamine 2-epimerase.
       0.663
AQM59227.1
NDP-sugDHase: nucleotide sugar dehydrogenase family protein; [M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
       0.549
AQM59456.1
Hypothetical protein.
       0.508
AQM59510.1
ABC transporter family protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
       0.495
AQM59563.1
vanZ like family protein; [V] COG4767 Glycopeptide antibiotics resistance protein.
       0.495
AQM59624.1
Glycosyl transferases group 1 family protein; [M] COG0438 Glycosyltransferase.
       0.489
AQM58649.1
Glycosyl transferases group 1 family protein; [M] COG0438 Glycosyltransferase.
       0.489
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.