STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59811.1wecB: UDP-N-acetylglucosamine 2-epimerase; [M] COG0381 UDP-N-acetylglucosamine 2-epimerase. (374 aa)    
Predicted Functional Partners:
AQM59227.1
NDP-sugDHase: nucleotide sugar dehydrogenase family protein; [M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
  
 0.964
AQM59624.1
Glycosyl transferases group 1 family protein; [M] COG0438 Glycosyltransferase.
 
  
 0.809
AQM59799.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.803
AQM60324.1
Glycosyltransferase, group 2 family domain protein.
 
   
 0.798
AQM60684.1
Heparinase II/III-like family protein.
 
    0.734
AQM59020.1
Hypothetical protein.
       0.663
AQM59908.1
Putative membrane protein.
  
  
 0.662
AQM60104.1
Glycosyl transferase 4 family protein; [M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
  
 0.610
AQM58649.1
Glycosyl transferases group 1 family protein; [M] COG0438 Glycosyltransferase.
 
  
 0.602
AQM59563.1
vanZ like family protein; [V] COG4767 Glycopeptide antibiotics resistance protein.
       0.570
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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