STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM58713.1core-2/I-Branching enzyme family protein. (293 aa)    
Predicted Functional Partners:
galU
galU: UTP--glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase.
     
 0.787
AQM59908.1
Putative membrane protein.
  
  
 0.685
AQM60246.1
EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.672
AQM61095.1
Acyltransferase family protein; [G] COG3594 Fucose 4-O-acetylase and related acetyltransferases.
  
  
 0.659
AQM59439.1
Glycosyl transferases group 1 family protein; [M] COG0438 Glycosyltransferase.
 
  
 0.630
AQM58877.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.605
AQM59086.1
PHP domain protein; [GM] COG4464 Capsular polysaccharide biosynthesis protein.
 
   
 0.558
AQM60394.1
Glycosyl transferases group 1 family protein; [M] COG0438 Glycosyltransferase.
  
  
 0.558
ywqD
Eps_fam: capsular exopolysaccharide family domain protein; [D] COG0489 ATPases involved in chromosome partitioning.
 
  
 0.555
AQM60333.1
Chain length determinant family protein; [M] COG3944 Capsular polysaccharide biosynthesis protein.
 
  
 0.540
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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