STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM61095.1Acyltransferase family protein; [G] COG3594 Fucose 4-O-acetylase and related acetyltransferases. (337 aa)    
Predicted Functional Partners:
AQM58713.1
core-2/I-Branching enzyme family protein.
  
  
 0.659
galU
galU: UTP--glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase.
       0.631
AQM60246.1
EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.600
AQM61046.1
Signal peptidase (SPase) II family protein.
  
   
 0.595
AQM59908.1
Putative membrane protein.
  
  
 0.591
NPD11_977
3'-5' exonuclease family protein; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
  
     0.587
AQM60048.1
Conserved hypothetical protein; [J] COG2868 Predicted ribosomal protein.
  
     0.586
AQM60728.1
gtrA-like family protein; [S] COG2246 Predicted membrane protein.
  
     0.580
AQM58720.1
Acyltransferase family protein; [G] COG3594 Fucose 4-O-acetylase and related acetyltransferases.
  
     0.567
AQM61368.1
Ribosomal RNA adenine dimethylase family protein.
  
     0.560
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.