Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQM58721.1 | AQM60044.1 | NPD11_2511 | NPD11_2508 | Hypothetical protein. | Hypothetical protein. | 0.604 |
AQM58721.1 | AQM61027.1 | NPD11_2511 | NPD11_2510 | Hypothetical protein. | Conserved hypothetical protein; [S] COG3864 Uncharacterized protein conserved in bacteria. | 0.655 |
AQM58721.1 | AQM61415.1 | NPD11_2511 | NPD11_2509 | Hypothetical protein. | Sigma-54 interaction domain protein; [R] COG0714 MoxR-like ATPases. | 0.625 |
AQM60044.1 | AQM58721.1 | NPD11_2508 | NPD11_2511 | Hypothetical protein. | Hypothetical protein. | 0.604 |
AQM60044.1 | AQM61027.1 | NPD11_2508 | NPD11_2510 | Hypothetical protein. | Conserved hypothetical protein; [S] COG3864 Uncharacterized protein conserved in bacteria. | 0.942 |
AQM60044.1 | AQM61415.1 | NPD11_2508 | NPD11_2509 | Hypothetical protein. | Sigma-54 interaction domain protein; [R] COG0714 MoxR-like ATPases. | 0.953 |
AQM61027.1 | AQM58721.1 | NPD11_2510 | NPD11_2511 | Conserved hypothetical protein; [S] COG3864 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.655 |
AQM61027.1 | AQM60044.1 | NPD11_2510 | NPD11_2508 | Conserved hypothetical protein; [S] COG3864 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.942 |
AQM61027.1 | AQM61415.1 | NPD11_2510 | NPD11_2509 | Conserved hypothetical protein; [S] COG3864 Uncharacterized protein conserved in bacteria. | Sigma-54 interaction domain protein; [R] COG0714 MoxR-like ATPases. | 0.950 |
AQM61415.1 | AQM58721.1 | NPD11_2509 | NPD11_2511 | Sigma-54 interaction domain protein; [R] COG0714 MoxR-like ATPases. | Hypothetical protein. | 0.625 |
AQM61415.1 | AQM60044.1 | NPD11_2509 | NPD11_2508 | Sigma-54 interaction domain protein; [R] COG0714 MoxR-like ATPases. | Hypothetical protein. | 0.953 |
AQM61415.1 | AQM61027.1 | NPD11_2509 | NPD11_2510 | Sigma-54 interaction domain protein; [R] COG0714 MoxR-like ATPases. | Conserved hypothetical protein; [S] COG3864 Uncharacterized protein conserved in bacteria. | 0.950 |