STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galE-2galE: UDP-glucose 4-epimerase GalE; [M] COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)    
Predicted Functional Partners:
galT
galT_2: galactose-1-phosphate uridylyltransferase; [G] COG4468 Galactose-1-phosphate uridyltransferase.
 
 
 0.995
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.974
galU
galU: UTP--glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase.
 
  
 0.924
galU-2
galU: UTP--glucose-1-phosphate uridylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase.
 
  
 0.924
galE
galE: UDP-glucose 4-epimerase GalE; [M] COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 
0.901
AQM60915.1
Helix-turn-helix family protein; [K] COG1609 Transcriptional regulators.
  
 
 0.839
AQM60351.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.493
AQM58877.1
Glycosyltransferase like 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.489
AQM59396.1
Periplasmic binding domain protein; [G] COG1879 ABC-type sugar transport system, periplasmic component.
  
    0.453
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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