STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59037.1[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters. (265 aa)    
Predicted Functional Partners:
AQM60031.1
ABC transporter family protein; [P] COG1122 ABC-type cobalt transport system, ATPase component.
 
 
 0.982
AQM59050.1
Cobalt uptake substrate-specific transmembrane region family protein; [P] COG0310 ABC-type Co2+ transport system, permease component.
 
 
 0.977
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 
 0.883
ecfA
ABC transporter family protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.728
ecfA-2
ABC transporter family protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.728
cbiN
Cobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
  
 0.703
AQM59059.1
[R] COG1691 NCAIR mutase (PurE)-related proteins.
 
    0.698
AQM60295.1
Hypothetical protein.
 
  
 0.684
AQM58696.1
bioY family protein; [R] COG1268 Uncharacterized conserved protein.
  
 
 0.679
AQM58658.1
Conserved hypothetical protein; [S] COG4684 Predicted membrane protein.
   
 
 0.640
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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