STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60031.1ABC transporter family protein; [P] COG1122 ABC-type cobalt transport system, ATPase component. (241 aa)    
Predicted Functional Partners:
AQM59037.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.982
AQM59050.1
Cobalt uptake substrate-specific transmembrane region family protein; [P] COG0310 ABC-type Co2+ transport system, permease component.
 
 
 0.938
ecfT
Cobalt transport family protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.897
AQM59319.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.791
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 
 0.731
AQM58696.1
bioY family protein; [R] COG1268 Uncharacterized conserved protein.
   
 
 0.647
AQM58658.1
Conserved hypothetical protein; [S] COG4684 Predicted membrane protein.
   
 
 0.598
AQM59059.1
[R] COG1691 NCAIR mutase (PurE)-related proteins.
 
    0.572
rpsD-2
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
 
  
 0.529
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
    0.468
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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