STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM61412.1prkA AAA domain protein; [T] COG2766 Putative Ser protein kinase. (640 aa)    
Predicted Functional Partners:
yhbH
spore_yhbH: sporulation protein YhbH; [S] COG2718 Uncharacterized conserved protein; Belongs to the UPF0229 family.
 
  
 0.993
AQM61435.1
spoVR like family protein; [S] COG2719 Uncharacterized conserved protein.
 
  
 0.993
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.761
AQM58985.1
Rubrerythrin family protein; [C] COG1592 Rubrerythrin.
       0.698
AQM60382.1
Hypothetical protein.
       0.568
NPD11_857
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
   
    0.543
glgA
Glycogen/starch synthase, ADP-glucose type family protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.517
glgA-2
Glycogen/starch synthase, ADP-glucose type family protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.517
AQM60212.1
Hypothetical protein.
       0.488
AQM60209.1
Fructosamine kinase family protein.
   
    0.482
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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