STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhbHspore_yhbH: sporulation protein YhbH; [S] COG2718 Uncharacterized conserved protein; Belongs to the UPF0229 family. (392 aa)    
Predicted Functional Partners:
AQM61412.1
prkA AAA domain protein; [T] COG2766 Putative Ser protein kinase.
 
  
 0.993
AQM61435.1
spoVR like family protein; [S] COG2719 Uncharacterized conserved protein.
 
  
 0.992
AQM58985.1
Rubrerythrin family protein; [C] COG1592 Rubrerythrin.
       0.702
AQM60382.1
Hypothetical protein.
       0.572
AQM61262.1
spore_CotS: spore coat, CotS family protein.
  
  
 0.560
AQM60212.1
Hypothetical protein.
       0.495
NPD11_109
[L] COG0629 Single-stranded DNA-binding protein.
   
    0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.