AQM59326.1 protein (Clostridium baratii) - STRING interaction network

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AQM59326.1

spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. (153 aa)

Predicted Functional Partners:

AQM60020.1

0.820

AQM60462.1

0.638

rpoN

0.632

splB

0.622

AQM60272.1

0.570

rlmH

0.527

AQM60247.1

0.488

cggR

0.417

rsmB

0.402

mraY

0.400

Your Current Organism:

Clostridium baratii

NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQM59326.1	AQM60020.1	NPD11_2658	NPD11_2659	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	0.820
AQM59326.1	AQM60247.1	NPD11_2658	NPD11_1753	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	FAD dependent oxidoreductase family protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).	0.488
AQM59326.1	AQM60272.1	NPD11_2658	NPD11_2656	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Pglycolate_arch: phosphoglycolate phosphatase, TA0175-type; [R] COG0561 Predicted hydrolases of the HAD superfamily.	0.570
AQM59326.1	AQM60462.1	NPD11_2658	NPD11_2660	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Basic membrane family protein; [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.	0.638
AQM59326.1	cggR	NPD11_2658	NPD11_2662	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	Putative sugar-binding domain protein; [K] COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain.	0.417
AQM59326.1	mraY	NPD11_2658	NPD11_157	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.	0.400
AQM59326.1	rlmH	NPD11_2658	NPD11_1971	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.527
AQM59326.1	rpoN	NPD11_2658	NPD11_2661	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	rpoN_sigma: RNA polymerase sigma-54 factor; [K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.	0.632
AQM59326.1	rsmB	NPD11_2658	NPD11_185	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.402
AQM59326.1	splB	NPD11_2658	NPD11_2657	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	photo_TT_lyase: spore photoproduct lyase; [L] COG1533 DNA repair photolyase.	0.622
AQM60020.1	AQM59326.1	NPD11_2659	NPD11_2658	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.820
AQM60020.1	AQM60272.1	NPD11_2659	NPD11_2656	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	Pglycolate_arch: phosphoglycolate phosphatase, TA0175-type; [R] COG0561 Predicted hydrolases of the HAD superfamily.	0.524
AQM60020.1	AQM60462.1	NPD11_2659	NPD11_2660	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	Basic membrane family protein; [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.	0.703
AQM60020.1	cggR	NPD11_2659	NPD11_2662	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	Putative sugar-binding domain protein; [K] COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain.	0.482
AQM60020.1	rpoN	NPD11_2659	NPD11_2661	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	rpoN_sigma: RNA polymerase sigma-54 factor; [K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog.	0.579
AQM60020.1	splB	NPD11_2659	NPD11_2657	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	photo_TT_lyase: spore photoproduct lyase; [L] COG1533 DNA repair photolyase.	0.599
AQM60247.1	AQM59326.1	NPD11_1753	NPD11_2658	FAD dependent oxidoreductase family protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.488
AQM60272.1	AQM59326.1	NPD11_2656	NPD11_2658	Pglycolate_arch: phosphoglycolate phosphatase, TA0175-type; [R] COG0561 Predicted hydrolases of the HAD superfamily.	spoU rRNA Methylase family protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.	0.570
AQM60272.1	AQM60020.1	NPD11_2656	NPD11_2659	Pglycolate_arch: phosphoglycolate phosphatase, TA0175-type; [R] COG0561 Predicted hydrolases of the HAD superfamily.	degV: EDD, DegV family domain protein; [S] COG1307 Uncharacterized protein conserved in bacteria.	0.524
AQM60272.1	splB	NPD11_2656	NPD11_2657	Pglycolate_arch: phosphoglycolate phosphatase, TA0175-type; [R] COG0561 Predicted hydrolases of the HAD superfamily.	photo_TT_lyase: spore photoproduct lyase; [L] COG1533 DNA repair photolyase.	0.675

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