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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60436.1Oxidoreductase NAD-binding domain protein; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (296 aa)    
Predicted Functional Partners:
gltA-2
gltA: glutamate synthase (NADPH), homotetrameric; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.996
gltA
gltA: glutamate synthase (NADPH), homotetrameric; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.984
AQM61094.1
NAD-dependent glycerol-3-phosphate dehydrogenase family protein; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.934
AQM59098.1
Oxidoreductase NAD-binding domain protein; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
  
 
0.900
NPD11_730
FAD dependent oxidoreductase family protein; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.894
pyrD
Dihydroorotate dehydrogenase family domain protein; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.828
NPD11_729
pyrD_sub1_fam: dihydroorotate dehydrogenase family domain protein; [F] COG0167 Dihydroorotate dehydrogenase.
  
 
 0.746
AQM61353.1
Iron-containing alcohol dehydrogenase family protein; [C] COG1454 Alcohol dehydrogenase, class IV.
     
 0.680
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
  
 0.636
carB
CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit; [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
  
 
 0.580
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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