STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60209.1Fructosamine kinase family protein. (323 aa)    
Predicted Functional Partners:
AQM61412.1
prkA AAA domain protein; [T] COG2766 Putative Ser protein kinase.
   
    0.482
NPD11_532
Hypothetical protein; Polysaccharide lyase family 8, C-terminal beta-sandwich domain protein.
  
     0.477
fucO
Lactal_redase: lactaldehyde reductase; [C] COG1454 Alcohol dehydrogenase, class IV.
       0.460
NPD11_890
Acetyltransferase domain protein; [R] COG5628 Predicted acetyltransferase.
  
     0.455
NPD11_46
Metallo-beta-lactamase superfamily protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
  
    0.442
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
       0.426
AQM58942.1
ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type; [P] COG0474 Cation transport ATPase.
  
    0.418
AQM60366.1
Transcriptional regulator PadR-like family protein; [K] COG1695 Predicted transcriptional regulators.
 
     0.407
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.