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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucOLactal_redase: lactaldehyde reductase; [C] COG1454 Alcohol dehydrogenase, class IV. (382 aa)    
Predicted Functional Partners:
AQM60016.1
eutH_ACDH: acetaldehyde dehydrogenase; [C] COG1012 NAD-dependent aldehyde dehydrogenases.
 
 0.937
AQM60433.1
[C] COG1012 NAD-dependent aldehyde dehydrogenases.
 
 0.934
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
  
 0.701
AQM60209.1
Fructosamine kinase family protein.
       0.460
glgA
Glycogen/starch synthase, ADP-glucose type family protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.436
glgA-2
Glycogen/starch synthase, ADP-glucose type family protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.436
NPD11_745
Glycosyl hydrolase 85 family protein; [G] COG4724 Endo-beta-N-acetylglucosaminidase D.
   
    0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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