STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiNCobalt transport family protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (97 aa)    
Predicted Functional Partners:
AQM59319.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.997
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 
 0.995
cobK
Precor6x_red: precorrin-6x reductase; [H] COG2099 Precorrin-6x reductase.
 
  
 0.926
AQM59609.1
[H] COG2073 Cobalamin biosynthesis protein CbiG.
 
  
 0.922
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.910
cbiE
cbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; [H] COG2241 Precorrin-6B methylase 1.
 
  
 0.904
cobJ
cobJ_cbiH: precorrin-3B C17-methyltransferase; [H] COG1010 Precorrin-3B methylase.
 
  
 0.893
cobM
cobM_cbiF: precorrin-4 C11-methyltransferase; [H] COG2875 Precorrin-4 methylase.
 
  
 0.875
cbiT
cbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; [H] COG2242 Precorrin-6B methylase 2.
 
  
 0.869
cobI
Precorrin-2 C(20)-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.
 
  
 0.869
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.