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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59978.1apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. (343 aa)    
Predicted Functional Partners:
AQM61489.1
ubiA prenyltransferase family protein; [H] COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.914
AQM59958.1
Heptaprenyl diphosphate synthase component I family protein; [S] COG4769 Predicted membrane protein.
 
   
 0.881
AQM59079.1
FMN-binding domain protein; [S] COG4939 Major membrane immunogen, membrane-anchored lipoprotein.
 
   
 0.842
AQM60961.1
Conserved hypothetical protein; [S] COG5341 Uncharacterized protein conserved in bacteria.
 
     0.831
AQM59025.1
Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.770
AQM60658.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.763
AQM58914.1
Polyprenyl synthetase family protein; [H] COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
   
 0.615
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
     
 0.500
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.443
AQM60726.1
Putative membrane protein; [R] COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
   
 0.400
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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