STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM60996.1[KT] COG4565 Response regulator of citrate/malate metabolism. (224 aa)    
Predicted Functional Partners:
AQM60405.1
Sensory box protein; [T] COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism.
 
 
 0.985
NPD11_815
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.895
AQM61381.1
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein; [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.686
AQM59509.1
Hypothetical protein.
       0.623
AQM59688.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
 
 0.620
AQM59376.1
Membrane transport family protein; [R] COG0679 Predicted permeases.
 
     0.576
AQM60825.1
GHKL domain protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
 
 0.550
NPD11_631
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
 
 0.550
AQM61498.1
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
  
   
 0.456
AQM58885.1
Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
   
 0.429
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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