STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asrA-2sulfite_red_A: sulfite reductase, subunit A; [C] COG1145 Ferredoxin. (339 aa)    
Predicted Functional Partners:
asrB-2
sulfite_red_B: sulfite reductase, subunit B; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 0.998
asrC-2
sulfite_red_C: sulfite reductase, subunit C; [C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.995
asrB
sulfite_red_B: sulfite reductase, subunit B; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 0.992
asrC
sulfite_red_C: sulfite reductase, subunit C; [C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.986
cysK
cysK: cysteine synthase A; [E] COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.906
asrA
sulfite_red_A: sulfite reductase, subunit A; [C] COG1145 Ferredoxin.
  
  
 
0.905
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
  
 0.794
AQM60566.1
Hypothetical protein.
  
 
 0.729
AQM60275.1
Cyclic nucleotide-binding domain protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
   
 0.724
AQM61139.1
NAD(P)-binding family protein; [H] COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain).
     
 0.638
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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