Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQM59475.1 | AQM59943.1 | NPD11_2839 | NPD11_1111 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | Pseudouridine synthase, RluA family protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.454 |
| AQM59475.1 | AQM60578.1 | NPD11_2839 | NPD11_2860 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | Beta-eliminating lyase family protein; [E] COG0520 Selenocysteine lyase. | 0.582 |
| AQM59475.1 | AQM61130.1 | NPD11_2839 | NPD11_2838 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | Hypothetical protein. | 0.550 |
| AQM59475.1 | NPD11_208 | NPD11_2839 | NPD11_208 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | Radical SAM superfamily protein; [KB] COG1243 Histone acetyltransferase. | 0.430 |
| AQM59475.1 | mfd | NPD11_2839 | NPD11_1736 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.458 |
| AQM59475.1 | pth | NPD11_2839 | NPD11_1737 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.478 |
| AQM59475.1 | trmB | NPD11_2839 | NPD11_702 | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.403 |
| AQM59943.1 | AQM59475.1 | NPD11_1111 | NPD11_2839 | Pseudouridine synthase, RluA family protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.454 |
| AQM60578.1 | AQM59475.1 | NPD11_2860 | NPD11_2839 | Beta-eliminating lyase family protein; [E] COG0520 Selenocysteine lyase. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.582 |
| AQM61130.1 | AQM59475.1 | NPD11_2838 | NPD11_2839 | Hypothetical protein. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.550 |
| NPD11_208 | AQM59475.1 | NPD11_208 | NPD11_2839 | Radical SAM superfamily protein; [KB] COG1243 Histone acetyltransferase. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.430 |
| mfd | AQM59475.1 | NPD11_1736 | NPD11_2839 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.458 |
| mfd | pth | NPD11_1736 | NPD11_1737 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.921 |
| pth | AQM59475.1 | NPD11_1737 | NPD11_2839 | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.478 |
| pth | mfd | NPD11_1737 | NPD11_1736 | aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.921 |
| trmB | AQM59475.1 | NPD11_702 | NPD11_2839 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | PP-loop family protein; [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. | 0.403 |