STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM58729.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
AQM60151.1
Hypothetical protein.
       0.782
AQM61049.1
mazG-like family protein.
  
     0.718
AQM60578.1
Beta-eliminating lyase family protein; [E] COG0520 Selenocysteine lyase.
 
   
 0.610
AQM59053.1
Hypothetical protein.
 
  
 0.581
NPD11_248
spore_YlmC_YmxH: sporulation, YlmC/YmxH family protein; [S] COG1873 Uncharacterized conserved protein.
  
     0.568
AQM60496.1
[T] COG1716 FOG: FHA domain.
   
 
 0.558
AQM59068.1
Hypothetical protein.
 
 
 
 0.558
AQM58934.1
lysM domain protein; [M] COG1388 FOG: LysM repeat.
 
  
 0.487
AQM59820.1
Hypothetical protein.
       0.483
AQM60270.1
Hypothetical protein.
  
 
 
 0.480
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.