AQM59836.1 protein (Clostridium baratii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AQM59836.1

Dehydratase medium subunit. (118 aa)

Predicted Functional Partners:

dhaB4

0.991

dhaB3

0.969

gldB

0.940

dhaB

0.933

AQM60827.1

0.920

AQM60466.1

0.887

NPD11_465

0.823

AQM59015.1

0.712

AQM59264.1

0.535

dhaT

0.475

Your Current Organism:

Clostridium baratii

NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQM59015.1	AQM59264.1	NPD11_2885	NPD11_2886	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	0.959
AQM59015.1	AQM59836.1	NPD11_2885	NPD11_2891	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	Dehydratase medium subunit.	0.712
AQM59015.1	AQM60466.1	NPD11_2885	NPD11_2892	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	ATP:cob(I)alamin adenosyltransferase; pduO_Nterm: ATP:cob(I)alamin adenosyltransferase; [S] COG2096 Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.	0.766
AQM59015.1	AQM60827.1	NPD11_2885	NPD11_2893	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	Conserved hypothetical protein; [R] COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol.	0.524
AQM59015.1	dhaB	NPD11_2885	NPD11_2887	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	[Q] COG4909 Propanediol dehydratase, large subunit.	0.758
AQM59015.1	dhaB3	NPD11_2885	NPD11_2889	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	[Q] COG4910 Propanediol dehydratase, small subunit.	0.715
AQM59015.1	dhaB4	NPD11_2885	NPD11_2890	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	reactive_PduG: diol dehydratase reactivase alpha subunit.	0.574
AQM59015.1	gldB	NPD11_2885	NPD11_2888	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	Glycerol dehydrase beta subunit; [Q] COG4909 Propanediol dehydratase, large subunit.	0.737
AQM59264.1	AQM59015.1	NPD11_2886	NPD11_2885	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	0.959
AQM59264.1	AQM59836.1	NPD11_2886	NPD11_2891	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	Dehydratase medium subunit.	0.535
AQM59264.1	dhaB	NPD11_2886	NPD11_2887	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	[Q] COG4909 Propanediol dehydratase, large subunit.	0.548
AQM59264.1	dhaB3	NPD11_2886	NPD11_2889	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	[Q] COG4910 Propanediol dehydratase, small subunit.	0.519
AQM59264.1	dhaB4	NPD11_2886	NPD11_2890	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	reactive_PduG: diol dehydratase reactivase alpha subunit.	0.497
AQM59264.1	gldB	NPD11_2886	NPD11_2888	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	Glycerol dehydrase beta subunit; [Q] COG4909 Propanediol dehydratase, large subunit.	0.538
AQM59836.1	AQM59015.1	NPD11_2891	NPD11_2885	Dehydratase medium subunit.	Histidine kinase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.	0.712
AQM59836.1	AQM59264.1	NPD11_2891	NPD11_2886	Dehydratase medium subunit.	Helix-turn-helix domain protein; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.	0.535
AQM59836.1	AQM60466.1	NPD11_2891	NPD11_2892	Dehydratase medium subunit.	ATP:cob(I)alamin adenosyltransferase; pduO_Nterm: ATP:cob(I)alamin adenosyltransferase; [S] COG2096 Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.	0.887
AQM59836.1	AQM60827.1	NPD11_2891	NPD11_2893	Dehydratase medium subunit.	Conserved hypothetical protein; [R] COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol.	0.920
AQM59836.1	NPD11_465	NPD11_2891	NPD11_465	Dehydratase medium subunit.	Cell division FtsA family protein; [D] COG0849 Actin-like ATPase involved in cell division.	0.823
AQM59836.1	dhaB	NPD11_2891	NPD11_2887	Dehydratase medium subunit.	[Q] COG4909 Propanediol dehydratase, large subunit.	0.933

page 1 of 5

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About