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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQM59102.1HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, IB family protein; [E] COG0560 Phosphoserine phosphatase. (212 aa)    
Predicted Functional Partners:
AQM61372.1
phosphoribosyl-AMP cyclohydrolase family protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family.
  
  
 0.842
cheD
cheD chemotactic sensory transduction family protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
    0.819
AQM59628.1
cheC-like family protein; [NT] COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
  
    0.796
AQM61192.1
Hypothetical protein.
 
     0.773
AQM58665.1
cheW-like domain protein; [NT] COG0835 Chemotaxis signal transduction protein.
       0.711
AQM61157.1
cheW-like domain protein; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases.
  
    0.661
AQM61419.1
cheR methyltransferase, SAM binding domain protein; [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins.
  
    0.647
AQM60124.1
Hypothetical protein.
  
     0.627
AQM59168.1
Conserved hypothetical protein; [T] COG0784 FOG: CheY-like receiver.
       0.598
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
  
 0.591
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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