Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQM60435.1 | AQM60774.1 | NPD11_2943 | NPD11_2945 | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | 0.776 |
| AQM60435.1 | cdd | NPD11_2943 | NPD11_2946 | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.570 |
| AQM60435.1 | era | NPD11_2943 | NPD11_2947 | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.560 |
| AQM60435.1 | ybeY | NPD11_2943 | NPD11_2944 | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.774 |
| AQM60774.1 | AQM60435.1 | NPD11_2945 | NPD11_2943 | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | 0.776 |
| AQM60774.1 | cdd | NPD11_2945 | NPD11_2946 | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.681 |
| AQM60774.1 | era | NPD11_2945 | NPD11_2947 | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.785 |
| AQM60774.1 | ybeY | NPD11_2945 | NPD11_2944 | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.974 |
| NPD11_279 | rplK | NPD11_279 | NPD11_1659 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.793 |
| NPD11_279 | rplQ | NPD11_279 | NPD11_1618 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | L17: ribosomal protein L17; [J] COG0203 Ribosomal protein L17. | 0.947 |
| NPD11_279 | rplU | NPD11_279 | NPD11_1299 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.860 |
| NPD11_279 | rpsQ | NPD11_279 | NPD11_1639 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.947 |
| NPD11_279 | sodA | NPD11_279 | NPD11_1495 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.971 |
| NPD11_279 | ybeY | NPD11_279 | NPD11_2944 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.916 |
| cdd | AQM60435.1 | NPD11_2946 | NPD11_2943 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | 0.570 |
| cdd | AQM60774.1 | NPD11_2946 | NPD11_2945 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | 0.681 |
| cdd | era | NPD11_2946 | NPD11_2947 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.945 |
| cdd | ybeY | NPD11_2946 | NPD11_2944 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.974 |
| era | AQM60435.1 | NPD11_2947 | NPD11_2943 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | HDIG: HDIG domain protein; [R] COG1480 Predicted membrane-associated HD superfamily hydrolase. | 0.560 |
| era | AQM60774.1 | NPD11_2947 | NPD11_2945 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Prokaryotic diacylglycerol kinase family protein; [M] COG0818 Diacylglycerol kinase. | 0.785 |
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