Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AQM61392.13D domain protein; [S] COG3584 Uncharacterized protein conserved in bacteria. (404 aa)    
Predicted Functional Partners:
AQM60430.1
3D domain protein; [S] COG3583 Uncharacterized protein conserved in bacteria.
 
  
0.954
entD
mannosyl-glycoendo-beta-N-acetylglucosamidase domain protein, possible enterotoxin; [G] COG4193 Beta- N-acetylglucosaminidase.
 
  
 0.596
AQM59066.1
ftsX-like permease family protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.530
NPD11_666
NADPH-dependent FMN reductase family protein; [R] COG0655 Multimeric flavodoxin WrbA.
   
  
 0.524
NPD11_836
NADPH-dependent FMN reductase family protein; [R] COG0655 Multimeric flavodoxin WrbA.
   
  
 0.524
AQM60609.1
nlpC/P60 family protein; [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
 
 0.476
AQM61230.1
Pilus assembly, PilO family protein.
  
   0.460
NPD11_428
Phage_term_2: phage terminase, large subunit, PBSX family; [R] COG1783 Phage terminase large subunit.
  
  
 0.458
NPD11_646
[M] COG3409 Putative peptidoglycan-binding domain-containing protein.
  
 
 0.432
AQM61153.1
Hypothetical protein.
       0.425
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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