Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NPD11_367 | NPD11_462 | NPD11_367 | NPD11_462 | spoIIIAH-like family protein. | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.745 |
| NPD11_367 | NPD11_977 | NPD11_367 | NPD11_977 | spoIIIAH-like family protein. | 3'-5' exonuclease family protein; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.759 |
| NPD11_367 | NPD11_99 | NPD11_367 | NPD11_99 | spoIIIAH-like family protein. | Tetratricopeptide repeat family protein; [R] COG0457 FOG: TPR repeat. | 0.747 |
| NPD11_367 | spoIIIAA | NPD11_367 | NPD11_374 | spoIIIAH-like family protein. | spore_III_AA: stage III sporulation protein AA; [S] COG3854 Uncharacterized protein conserved in bacteria. | 0.925 |
| NPD11_367 | spoIIIAB | NPD11_367 | NPD11_373 | spoIIIAH-like family protein. | spore_III_AB: stage III sporulation protein AB. | 0.868 |
| NPD11_367 | spoIIIAC | NPD11_367 | NPD11_372 | spoIIIAH-like family protein. | spore_III_AC: stage III sporulation protein AC. | 0.833 |
| NPD11_367 | spoIIIAD | NPD11_367 | NPD11_371 | spoIIIAH-like family protein. | spore_III_AD: stage III sporulation protein AD. | 0.820 |
| NPD11_367 | spoIIIAE | NPD11_367 | NPD11_370 | spoIIIAH-like family protein. | spore_III_AE: stage III sporulation protein AE. | 0.936 |
| NPD11_367 | spoIIIAF | NPD11_367 | NPD11_369 | spoIIIAH-like family protein. | spore_III_AF: stage III sporulation protein AF. | 0.958 |
| NPD11_367 | spoIIIAG | NPD11_367 | NPD11_368 | spoIIIAH-like family protein. | spore_III_AG: stage III sporulation protein AG. | 0.999 |
| NPD11_462 | NPD11_367 | NPD11_462 | NPD11_367 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spoIIIAH-like family protein. | 0.745 |
| NPD11_462 | NPD11_977 | NPD11_462 | NPD11_977 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 3'-5' exonuclease family protein; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.469 |
| NPD11_462 | spoIIIAA | NPD11_462 | NPD11_374 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spore_III_AA: stage III sporulation protein AA; [S] COG3854 Uncharacterized protein conserved in bacteria. | 0.691 |
| NPD11_462 | spoIIIAB | NPD11_462 | NPD11_373 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spore_III_AB: stage III sporulation protein AB. | 0.719 |
| NPD11_462 | spoIIIAC | NPD11_462 | NPD11_372 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spore_III_AC: stage III sporulation protein AC. | 0.476 |
| NPD11_462 | spoIIIAD | NPD11_462 | NPD11_371 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spore_III_AD: stage III sporulation protein AD. | 0.645 |
| NPD11_462 | spoIIIAE | NPD11_462 | NPD11_370 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spore_III_AE: stage III sporulation protein AE. | 0.777 |
| NPD11_462 | spoIIIAG | NPD11_462 | NPD11_368 | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | spore_III_AG: stage III sporulation protein AG. | 0.722 |
| NPD11_977 | NPD11_367 | NPD11_977 | NPD11_367 | 3'-5' exonuclease family protein; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | spoIIIAH-like family protein. | 0.759 |
| NPD11_977 | NPD11_462 | NPD11_977 | NPD11_462 | 3'-5' exonuclease family protein; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Sporulation factor SpoIIGA family protein; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.469 |
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